PathIN - V:1.0.2
  •  Home
  •  Help on Web-Environment
  •  C-BIG Servers
Pathway Interaction Networks
Card image cap

SEARCH - ON THE

Upload your own list of genes, pathways and compounds or use the search tabs to create new ones.

  •  Upload your list
  •  Search Pathways
  •  Search Genes
  •  Search Compounds
  •  Examples
  •  Help

File Upload Tool

Use the tool below to upload your files. PathIN works with lists of pathway IDs as defined by each pathway repository. There are five types of supported files that the user can upload: (a) simple lists of pathways codes, (b) simple lists of compound codes, (c) simple lists of Glycan codes, (d) Tab-separated edge lists of pathway codes, and (e) list of gene symbols. Users should first know these IDs and provide them in text(.txt) file For details on file formats please refer to the Help Page.

Search Tool

Use the tool below to search for specific items. You can either use an ID or a name accordingly

List of examples

Select an example from the list below to automatically import data and evaluate this software.

List of File formats

 click to download the format of a KEGG pathway list example
 click to download the format of a gene list example
 click to download the format of a KEGG edge list example

      Pathway Interaction Networks

      interconnecting pathways through diverse pathway reference networks